CESSHIV-1 database

General information on HIV-1 isolate

# 1001

Accession number	EU000511
Name	INDARI-0218437 clone 3
Subtype	BC
Country	India
Sampling year	2002
Patient	7

EU000511 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagt gcactcggca agaggcgaga gg-ggcgactg gtgagtacgc caattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

EU000509(#999) EU000510(#1000)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy