CESSHIV-1 database

General information on HIV-1 isolate

# 1003

Accession number	EU000513
Name	INDARI-0218440 clone 2
Subtype	BC
Country	India
Sampling year	2002
Patient	8

EU000513 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggctcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcggctgg tgagtacgcc aattttattt gactagcggg ggctagaagg agaga

Isolates with identical sequences of region:

EU000514(#1004)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy