CESSHIV-1 database

General information on HIV-1 isolate

# 1005

Accession number	EU000515
Name	INDARI-9917796 clone 1
Subtype	BC
Country	India
Sampling year	1999
Patient	10

EU000515 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgagag -cggcgactgg tgagtacgcc aattttattt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy