CESSHIV-1 database

General information on HIV-1 isolate

# 1886

Accession number	EU047691
Name	03JIS10_3285_1
Subtype	B Korean
Country	South Korea
Sampling year	2003
Patient	JIS

EU047691 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactgggtt tgatgaagcg cgcacggcaa gaggcgaggg gcggcgtctg gtgaatacgc caaaattttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy