CESSHIV-1 database

General information on HIV-1 isolate

# 1898

Accession number	EU074783
Name	X138-8-PI-RNA
Subtype	BG
Country	Spain
Sampling year	2005
Patient	X138

EU074783 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacagcaa gaggcgagag -cggcgactgg tgagtacgcc ataaattttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy