CESSHIV-1 database

General information on HIV-1 isolate

# 1040

Accession number	EU110095
Name	ML1901PCR2
Subtype	A1
Country	Kenya
Sampling year	2001
Patient	ML1901

EU110095 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgactga agtgcacaca gcaagaggcg agag-cggcga ctggtgagta cgccatt--ttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

EU110087(#1032)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy