CESSHIV-1 database

General information on HIV-1 isolate

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Accession number	EU110097
Name	ML1990PCR
Subtype	A1
Country	Kenya
Sampling year	2002
Patient	ML1990

EU110097 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctga-gtgc acacagcaag aggcgagag-c ggcgactggt gagtacscca aaatttttga ctagcggagg ctagaaggag aga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy