CESSHIV-1 database

General information on HIV-1 isolate

# 2785

Accession number	EU170143
Name	luBF_17_05
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2005

EU170143 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY560110(#384) EU170151(#2793) EU170154(#2796)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy