CESSHIV-1 database

General information on HIV-1 isolate

# 1188

Accession number	EU786675
Name	ES X1959 (B)
Subtype	B
Country	Spain
Sampling year	2006
Patient	1959

EU786675 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgytgaagmg cgcacagcaa gaggcgaggg gcggcgaccg gtgagtacgc cataa-ttttg actagcagag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy