CESSHIV-1 database

General information on HIV-1 isolate

# 1190

Accession number	EU786677
Name	ES X2102 (B)
Subtype	B
Country	Spain
Sampling year	2006
Patient	2102

EU786677 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgcttgagcg cgcaaggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaa-ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy