CESSHIV-1 database

General information on HIV-1 isolate

# 1194

Accession number	EU786681
Name	ES X2363-2 (C)
Subtype	C
Country	Spain (Nigeria)
Sampling year	2008
Patient	2363

EU786681 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacggcaa gaggcgagag g-ggcgactgg tgagtacgcc aaattttaat tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy