CESSHIV-1 database

General information on HIV-1 isolate

# 1195

Accession number	EU884500
Name	ES X2118-2 (C)
Subtype	C
Country	Spain (Angola)
Sampling year	2007
Patient	2118

EU884500 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc aaaattttat ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy