CESSHIV-1 database

General information on HIV-1 isolate

# 1196

Accession number	EU884501
Name	ES P1423
Subtype	CRF02_AG
Country	Spain (Angola)
Sampling year	2006
Patient	P1423

EU884501 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggctcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy