CESSHIV-1 database

General information on HIV-1 isolate

# 1200

Accession number	FJ195088
Name	BREPM1084
Subtype	B
Country	Brazil
Sampling year	2005

FJ195088 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgctcagcaa gaggcgaggg gcggcaaccg gtaagtacgc caaaaataaa attttttgac tagcggaggc tagaaggaga gg

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy