CESSHIV-1 database

General information on HIV-1 isolate

# 1212

Accession number	FJ460500
Name	HK003
Subtype	B
Country	Hong Kong
Sampling year	2006

FJ460500 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

EF370336(#1776) FJ460499(#1211)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy