CESSHIV-1 database

General information on HIV-1 isolate

# 2836

Accession number	FJ495865
Name	CH40d111_G7
Subtype	B
Country	USA
Sampling year	2006
Patient	700010040

FJ495865 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgagag gcggcgactg gtgagtacgc caaaa-ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy