CESSHIV-1 database

General information on HIV-1 isolate

# 2029

Accession number	FJ496081
Name	04013396_0_flE6
Subtype	B
Country	USA
Sampling year	2005
Patient	04013396

FJ496081 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgctcggcaa gaggcgaggg gtcggcgact ggtgagtacg ccatattttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

FJ496082(#2030) FJ496083(#2031) FJ496084(#2032) FJ496085(#2033)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy