CESSHIV-1 database

General information on HIV-1 isolate

# 3354

Accession number	FJ614924
Name	08LKD5_4682s
Subtype	CRF02_AG
Country	South Korea (Ghana)
Sampling year	2008
Patient	LKD

FJ614924 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc ga---ttttgact agcggaggct agaaggagag a

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy