CESSHIV-1 database

General information on HIV-1 isolate

# 3359

Accession number	FJ614993
Name	04HAS12_4192
Subtype	CRF02_AG
Country	South Korea
Sampling year	2004
Patient	HAS

FJ614993 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctga-gtgc acacagcaag aggcgagag-c ggcgactggt gagtacgcca ta--ttttgact agcagaggct agaaggagag a

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy