CESSHIV-1 database

General information on HIV-1 isolate

# 3199

Accession number	FJ670516
Name	ES_X845-4
Subtype	F1
Country	Spain
Sampling year	2002
Patient	X845

FJ670516 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgaggg gagcggcgac tggtgagtac gccaat--tttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy