CESSHIV-1 database

General information on HIV-1 isolate

# 3237

Accession number	FJ670525
Name	X2425-2
Subtype	B
Country	Spain
Sampling year	2008
Patient	X2425

FJ670525 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc cat---ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy