CESSHIV-1 database

General information on HIV-1 isolate

# 3246

Accession number	FJ670527
Name	X963-4
Subtype	DF1G
Country	Spain
Sampling year	2004
Patient	X963

FJ670527 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgcagcg cgcacagcaa gaggcgaggg gcagcagctg gtgagtacgc tgaaa-ttttg actagcggag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy