CESSHIV-1 database

General information on HIV-1 isolate

# 3349

Accession number	FN392875
Name	97CD_MBS30
Subtype	CRF45_cpx
Country	DRC
Sampling year	1997
Patient	MBS30

FN392875 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aagaattttg actagcgaag gctagaagga gaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy