CESSHIV-1 database

General information on HIV-1 isolate

# 3350

Accession number	FN392876
Name	97CM_MP814
Subtype	CRF45_cpx
Country	Cameroon
Sampling year	1997
Patient	MP814

FN392876 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgstgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc att--ttttgac tagcgraggc taraaggara ra

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy