CESSHIV-1 database

General information on HIV-1 isolate

# 3253

Accession number	GQ372988
Name	ES X2515_3
Subtype	B
Country	Spain
Sampling year	2008
Patient	X2515

GQ372988 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgaacg gtgagtacgc caaaattttt ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy