CESSHIV-1 database

General information on HIV-1 isolate

# 3411

Accession number	GQ429847
Name	clone_31
Subtype	A1
Country	Kenya
Sampling year	1995
Patient	1(35465)

GQ429847 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcga gaggcgagag -cggcgactgg tgagtacgcc aat--ttttgac tagcagaggc tagaaggaga ga

Isolates with identical sequences of region:

GQ429817(#3248)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy