CESSHIV-1 database

General information on HIV-1 isolate

# 3415

Accession number	GQ429851
Name	clone_35
Subtype	A1
Country	Kenya
Sampling year	1995
Patient	1(35465)

GQ429851 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcggctgg tgagtacgcc aat--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy