CESSHIV-1 database

General information on HIV-1 isolate

# 3842

Accession number	GU362883
Name	X2555_2
Subtype	B
Country	Spain
Sampling year	2008
Patient	X2555

GU362883 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

DQ358807(#747) FJ460501(#1213)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy