CESSHIV-1 database

General information on HIV-1 isolate

# 3345

Accession number	HM026458
Name	07BR_FPS783
Subtype	CRF46_BF
Country	Brazil
Sampling year	2007
Patient	FPS783

HM026458 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc aaat-ttttga ctagcagagg ctagaaggag aga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy