CESSHIV-1 database

General information on HIV-1 isolate

# 3338

Accession number	HM586212
Name	MM45d213_GN1
Subtype	B
Country	United Kingdom
Sampling year	2005
Patient	MM45

HM586212 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AB485638(#2741) AB485639(#2742) AB485640(#2743) AY173953(#246) HM586210(#3336) HM586211(#3337)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy