CESSHIV-1 database

General information on HIV-1 isolate

# 2369

Accession number	M21137
Name	JH31
Subtype	B
Country	Japan
Sampling year	1986

M21137 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcggctg gtgagtacgc caaaaatttt gactagcgga ggctagaagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy