CESSHIV-1 database

General information on HIV-1 isolate

# 38

Accession number	U88823
Name	92RW009_06
Subtype	A1C
Country	Rwanda
Sampling year	1992
Patient	RW009

U88823 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagt gcactcggca agaggcgaga g-cggcggctg gtgagtacgc caaattttat ttgactagcg gaggctagaa ggagaga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy