CESSHIV-1 database

General information on HIV-1 isolate

# 2847

Accession number	EU170136
Name	luBF_13_05
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2005

EU170136 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gaccaattta gtccgtgtgg aaaatctcta gca

Isolates with identical sequences of region:

EU170144(#2786)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy