CESSHIV-1 database

General information on HIV-1 isolate

# 30

Accession number	U88822
Name	84zr085
Subtype	D
Country	DRC
Sampling year	1984
Patient	(59)

U88822 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttta agtagtgtgt gcccgtctgt tttgtgactc tggtaactag agatccctca gacagcttta gtccgggtgg aaaatctcta gca

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy