CESSHIV-1 database

General information on HIV-1 isolate

# 277

Accession number	AF224507
Name	HIV-1wk
Subtype	B
Country	South Korea
Sampling year	1997
Patient	WK(JWK)

AF224507 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa aacgaaagta gaaccggagg agctctctcg acgcaggac

Isolates with identical sequences of region:

EF370242(#1719)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy