CESSHIV-1 database

General information on HIV-1 isolate

# 363

Accession number	AY314058
Name	WC10C-6
Subtype	B
Country	Canada
Sampling year	1996
Patient	WC10

AY314058 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagactctt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagag aaaccagaga agatctctcg acgcaggac

Isolates with identical sequences of region:

AY314054(#359) AY314055(#360) AY314057(#362) AY314060(#365) AY314062(#367)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy