CESSHIV-1 database

General information on HIV-1 isolate

# 323

Accession number	AY463225
Name	C.ZA.1170MB
Subtype	C
Country	South Africa
Sampling year	2000
Patient	1170M

AY463225 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccttt ttgg-cagtat ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtaa gaccagagaa gaactctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy