CESSHIV-1 database

General information on HIV-1 isolate

# 325

Accession number	AY463227
Name	C.ZA.1225MB
Subtype	C
Country	South Africa
Sampling year	2000
Patient	1225M

AY463227 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtgg ctctggtaac tagagatccc tcagaccctt gttggtattg tggcaaatct ctagcagtgg cgcccgaaca gggacttgaa aacgaaagta gaaccagagg agatctcccg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy