CESSHIV-1 database

General information on HIV-1 isolate

# 408

Accession number	AY772695
Name	03ZASK112B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	SK-112

AY772695 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt tttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacgcgaa agcgaaagta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy