CESSHIV-1 database

General information on HIV-1 isolate

# 668

Accession number	DQ017383
Name	04CM-1131-03
Subtype	Group N
Country	Cameroon
Sampling year	2004
Patient	1131

DQ017383 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

cattcggtaa ctctggtacc tagagatccc tcagaccatc tg-gactgagt agaaaatctc tagcagtggc gcccgaacag ggacttgaaa acgaaagtag aaccggaggc tgaatctctc gacgcaagga c

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy