CESSHIV-1 database

General information on HIV-1 isolate

# 495

Accession number	DQ093591
Name	03ZAPS077B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	077B1

DQ093591 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttggt-agtgt ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtaa gaccagagga gatctctcga cgcaggac

Isolates with identical sequences of region:

AF405201(#1984)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy