CESSHIV-1 database

General information on HIV-1 isolate

# 497

Accession number	DQ093593
Name	03ZASK072B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	072B1

DQ093593 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagaggtccc tcagaccctt tttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agtgaaggta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy