CESSHIV-1 database

General information on HIV-1 isolate

# 507

Accession number	DQ093603
Name	04ZAPS208B1
Subtype	C
Country	South Africa
Sampling year	2004
Patient	208B1

DQ093603 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta agaccagaga agatctctcg acgcaggac

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy