CESSHIV-1 database

General information on HIV-1 isolate

# 510

Accession number	DQ093606
Name	04ZAPS204B1
Subtype	AC
Country	South Africa
Sampling year	2004
Patient	204B1

DQ093606 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt gttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agcgaaagta agaccagagc agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy