CESSHIV-1 database

General information on HIV-1 isolate

# 545

Accession number	DQ164108
Name	03ZASK226B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	226B1

DQ164108 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagatcctt tttggctgtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agtgaaagta agaccagaga agaagaactc tcgacgcagg gc

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy