CESSHIV-1 database

General information on HIV-1 isolate

# 550

Accession number	DQ164113
Name	03ZASK062B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	062B1

DQ164113 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgt-gtgtgac tctggtaact agagatccct cagacccttt gtggtagtgt ggaa--tctcta gcagtggcgc ccgaacaggg acgcgaaagc gaaagtaaga ccagaggaga tctctcgacg caggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy