CESSHIV-1 database

General information on HIV-1 isolate

# 563

Accession number	DQ164126
Name	04ZAPS206B1
Subtype	C
Country	South Africa
Sampling year	2004
Patient	206B1

DQ164126 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccaat tttggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggaccagaa agcgaaagta agaccagcgg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy