CESSHIV-1 database

General information on HIV-1 isolate

# 1243

Accession number	DQ275665
Name	03ZASK012B2
Subtype	C
Country	South Africa
Sampling year	2003
Patient	012B2

DQ275665 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgtagtaaga ctctagtaac taaagatccc tcagaccatt ttagt-agtgt agaaaatctc tagcagtggc gcccgaacag ggacctgaaa gcgaaggtga gaccagagaa gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy