CESSHIV-1 database

General information on HIV-1 isolate

# 617

Accession number	DQ351218
Name	02ZAPS014MB1
Subtype	C
Country	South Africa
Sampling year	2002
Patient	PS-014M

DQ351218 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcaaaagta agaccagaga agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy