CESSHIV-1 database

General information on HIV-1 isolate

# 631

Accession number	DQ351232
Name	04ZAPS157MB1
Subtype	C
Country	South Africa
Sampling year	2004
Patient	157MB

DQ351232 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttggt-agtgt ggaaaatctc tagcagtggt gcccgaacag ggacttgaaa gcgaaagtaa aaccagagaa gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy